Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding domain-containing protein | DSHI_RS04565 | Not Available | Positive | 909287 - 910375 | 37155.5 |
| peptidoglycan-binding domain-containing protein | DSHI_RS04570 | Not Available | Positive | 910592 - 911965 | 47221.2 |
| serine protease | DSHI_RS04575 | Not Available | Positive | 912355 - 914220 | 63429.9 |
| hypothetical protein | DSHI_RS04580 | Not Available | Positive | 914230 - 915495 | 44943.0 |
| virulence factor srfb | DSHI_RS04585 | Not Available | Positive | 915495 - 918620 | 117038.0 |
| putative virulence factor | DSHI_RS04590 | Not Available | Positive | 918640 - 921318 | 97083.1 |
| hypothetical protein | DSHI_RS04595 | Not Available | Positive | 921315 - 922355 | 35634.7 |
| vwa domain-containing protein | DSHI_RS04600 | Not Available | Positive | 922370 - 924292 | 69839.1 |
| abc transporter atp-binding protein | DSHI_RS04605 | Not Available | Positive | 924297 - 925022 | 25023.2 |
| abc transporter permease | DSHI_RS04610 | Not Available | Positive | 925019 - 926218 | 42001.6 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
