Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yggs family pyridoxal phosphate-dependent enzyme | DSHI_RS00205 | Not Available | Negative | 43160 - 43816 | 23382.1 |
| porin | DSHI_RS00210 | Not Available | Negative | 43903 - 44862 | 33221.6 |
| duf3576 domain-containing protein | DSHI_RS00215 | Not Available | Positive | 45163 - 45633 | 16901.9 |
| stas/sec14 domain-containing protein | DSHI_RS00220 | Not Available | Negative | 45640 - 46014 | 14326.8 |
| beta-1,6-n-acetylglucosaminyltransferase | DSHI_RS22665 | Not Available | Negative | 46071 - 46256 | 6864.22 |
| hypothetical protein | DSHI_RS00225 | Not Available | Positive | 46363 - 46704 | 12701.6 |
| is1595-like element isdsh3 family transposase | DSHI_RS00230 | Not Available | Negative | 47483 - 48445 | 36527.3 |
| duf6471 domain-containing protein | DSHI_RS00235 | Not Available | Positive | 48547 - 48753 | 7549.18 |
| imma/irre family metallo-endopeptidase | DSHI_RS00240 | Not Available | Negative | 48750 - 49232 | 17618.0 |
| hypothetical protein | DSHI_RS00245 | Not Available | Negative | 49229 - 49618 | 13731.4 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
