Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad kinase | DSHI_RS04210 | Not Available | Positive | 827012 - 827779 | 27525.2 |
| sigma-54 dependent transcriptional regulator | DSHI_RS04215 | Not Available | Negative | 827784 - 829175 | 50810.5 |
| response regulator | DSHI_RS04220 | Not Available | Negative | 829172 - 830626 | 52540.0 |
| propionate-coa ligase prpe | DSHI_RS04225 | Not Available | Negative | 830837 - 832729 | 68418.7 |
| nadp-dependent malic enzyme | DSHI_RS04230 | Not Available | Negative | 832910 - 835189 | 81481.3 |
| cytidine deaminase | DSHI_RS04235 | Not Available | Positive | 835363 - 835755 | 13194.7 |
| thymidine phosphorylase | DSHI_RS04240 | Not Available | Positive | 835752 - 837059 | 43655.5 |
| phosphopentomutase | DSHI_RS04245 | Not Available | Positive | 837056 - 838255 | 42087.0 |
| adenosine deaminase | DSHI_RS04250 | Not Available | Positive | 838252 - 839247 | 35771.2 |
| uracil phosphoribosyltransferase | DSHI_RS04255 | Not Available | Positive | 839244 - 839876 | 23000.2 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
