Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | DSHI_RS00155 | Not Available | Negative | 35239 - 36555 | 48699.3 |
| trm112 family protein | DSHI_RS00160 | Not Available | Negative | 36716 - 36907 | 7097.47 |
| lon peptidase substrate-binding domain-containing protein | DSHI_RS00165 | Not Available | Negative | 36904 - 37551 | 24331.2 |
| co-chaperone ybbn | DSHI_RS00170 | Not Available | Negative | 37578 - 38489 | 31961.8 |
| exodeoxyribonuclease iii | DSHI_RS00175 | Not Available | Negative | 38563 - 39351 | 29350.5 |
| vplpa-cterm sorting domain-containing protein | DSHI_RS00180 | Not Available | Positive | 39692 - 40216 | 17835.4 |
| response regulator transcription factor | DSHI_RS00185 | Not Available | Negative | 40432 - 41118 | 25648.9 |
| gtp cyclohydrolase ii | DSHI_RS00190 | Not Available | Positive | 41277 - 42347 | 38092.3 |
| duf1330 domain-containing protein | DSHI_RS00195 | Not Available | Positive | 42375 - 42662 | 10118.0 |
| l,d-transpeptidase | DSHI_RS00200 | Not Available | Positive | 42669 - 43163 | 18619.6 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
