Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein dctp | DSHI_RS03565 | Not Available | Positive | 703665 - 704675 | 36954.4 |
| trap transporter small permease | DSHI_RS03570 | Not Available | Positive | 704719 - 705225 | 18940.7 |
| trap transporter large permease subunit | DSHI_RS03575 | Not Available | Positive | 705226 - 706539 | 45829.6 |
| amp-binding protein | DSHI_RS03580 | Not Available | Positive | 706599 - 708116 | 54222.1 |
| trans-aconitate 2-methyltransferase | DSHI_RS03585 | Not Available | Negative | 708169 - 708822 | 24067.5 |
| wbqc family protein | DSHI_RS03590 | Not Available | Negative | 708819 - 709466 | 23326.4 |
| glycosyltransferase family 2 protein | DSHI_RS03595 | Not Available | Negative | 709466 - 710386 | 34044.9 |
| degt/dnrj/eryc1/strs aminotransferase family protein | DSHI_RS03600 | Not Available | Positive | 710678 - 711829 | 40817.7 |
| duf563 domain-containing protein | DSHI_RS03605 | Not Available | Positive | 711826 - 713256 | 52479.2 |
| glycosyltransferase 61 family protein | DSHI_RS21265 | Not Available | Positive | 713253 - 714434 | 43583.6 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
