Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DSHI_RS03515 | Not Available | Positive | 692556 - 693332 | 28759.0 |
| fad-dependent oxidoreductase | DSHI_RS03520 | Not Available | Negative | 693474 - 694838 | 46838.3 |
| oxaloacetate decarboxylase | DSHI_RS03525 | Not Available | Negative | 694835 - 695662 | 29455.2 |
| cysteine hydrolase family protein | DSHI_RS03530 | Not Available | Negative | 695710 - 696312 | 21618.9 |
| hydantoinase/oxoprolinase family protein | DSHI_RS03535 | Not Available | Negative | 696309 - 698378 | 71204.5 |
| hydantoinase b/oxoprolinase family protein | DSHI_RS03540 | Not Available | Negative | 698375 - 700072 | 59462.9 |
| nuclear transport factor 2 family protein | DSHI_RS03545 | Not Available | Negative | 700069 - 700644 | 20750.6 |
| gntr family transcriptional regulator | DSHI_RS03550 | Not Available | Positive | 700802 - 701602 | 28393.0 |
| 3-isopropylmalate dehydratase large subunit | DSHI_RS03555 | Not Available | Positive | 701599 - 702993 | 49279.8 |
| 3-isopropylmalate dehydratase small subunit | DSHI_RS03560 | Not Available | Positive | 702990 - 703649 | 23596.2 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
