Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cbb3-type cytochrome oxidase assembly protein ccos | DSHI_RS03415 | Not Available | Positive | 673314 - 673472 | 5901.0 |
| d-alanyl-d-alanine carboxypeptidase family protein | DSHI_RS03420 | Not Available | Negative | 673560 - 674981 | 50681.5 |
| had family hydrolase | DSHI_RS03425 | Not Available | Negative | 675215 - 675919 | 25457.6 |
| atp-dependent clp protease adapter clps | DSHI_RS03430 | Not Available | Positive | 676073 - 676393 | 12080.6 |
| class i sam-dependent methyltransferase | DSHI_RS03435 | Not Available | Positive | 676410 - 677411 | 35414.7 |
| sdr family nad(p)-dependent oxidoreductase | DSHI_RS03440 | Not Available | Positive | 677442 - 678248 | 28675.1 |
| hypothetical protein | DSHI_RS03445 | Not Available | Negative | 678229 - 678606 | 13545.1 |
| oxygen-dependent coproporphyrinogen oxidase | DSHI_RS03450 | Not Available | Positive | 678666 - 679559 | 33207.8 |
| gamma-glutamyltransferase | DSHI_RS03455 | Not Available | Positive | 679714 - 681504 | 61371.5 |
| serine hydrolase | DSHI_RS03460 | Not Available | Positive | 681643 - 683742 | 75172.7 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
