Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DSHI_RS03270 | Not Available | Positive | 638539 - 639300 | 28062.3 |
| s49 family peptidase | DSHI_RS03275 | Not Available | Positive | 639402 - 640199 | 29024.9 |
| hypothetical protein | DSHI_RS22540 | Not Available | Positive | 640204 - 640374 | 6081.98 |
| calcium/sodium antiporter | DSHI_RS03285 | Not Available | Positive | 640377 - 641315 | 32825.2 |
| sdr family oxidoreductase | DSHI_RS03290 | Not Available | Positive | 641326 - 642117 | 27790.2 |
| excinuclease abc subunit uvrc | DSHI_RS03295 | Not Available | Positive | 642411 - 644306 | 70026.5 |
| taxi family trap transporter solute-binding subunit | DSHI_RS03300 | Not Available | Positive | 644406 - 645413 | 34762.2 |
| trap transporter fused permease subunit | DSHI_RS03305 | Not Available | Positive | 645472 - 647574 | 72173.9 |
| fg-gap-like repeat-containing protein | DSHI_RS03310 | Not Available | Positive | 647766 - 650513 | 102464.0 |
| recombination mediator recr | DSHI_RS03315 | Not Available | Negative | 650663 - 651262 | 20938.3 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
