Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | DSHI_RS03075 | Not Available | Negative | 597820 - 599106 | 45931.2 |
| trap transporter small permease subunit | DSHI_RS03080 | Not Available | Negative | 599132 - 599698 | 20593.2 |
| trap transporter substrate-binding protein | DSHI_RS03085 | Not Available | Negative | 599763 - 600845 | 39238.4 |
| hypothetical protein | DSHI_RS03090 | Not Available | Negative | 600943 - 601713 | 27546.7 |
| plp-dependent aminotransferase family protein | DSHI_RS03095 | Not Available | Positive | 601843 - 603387 | 56799.2 |
| putative hydro-lyase | DSHI_RS21630 | Not Available | Negative | 603311 - 604093 | 28054.2 |
| nipsnap family protein | DSHI_RS22535 | Not Available | Negative | 604086 - 604646 | 21206.8 |
| mbl fold metallo-hydrolase | DSHI_RS03105 | Not Available | Negative | 605184 - 606101 | 32646.4 |
| spfh domain-containing protein | DSHI_RS03110 | Not Available | Positive | 606284 - 607171 | 32068.6 |
| nfed family protein | DSHI_RS03115 | Not Available | Positive | 607168 - 607452 | 10018.6 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
