Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DSHI_RS02925 | Not Available | Negative | 565766 - 566635 | 31309.8 |
| aldehyde dehydrogenase family protein | DSHI_RS02930 | Not Available | Positive | 566726 - 568177 | 51238.9 |
| membrane dipeptidase | DSHI_RS02935 | Not Available | Positive | 568174 - 569184 | 37367.9 |
| bcct family transporter | DSHI_RS02940 | Not Available | Positive | 569219 - 570778 | 55167.6 |
| hypothetical protein | DSHI_RS02945 | Not Available | Positive | 570846 - 572522 | 61945.8 |
| duf3726 domain-containing protein | DSHI_RS02950 | Not Available | Positive | 572519 - 573250 | 25758.5 |
| rida family protein | DSHI_RS02955 | Not Available | Positive | 573264 - 573629 | 12677.3 |
| Trna-gln | Not Available | Not Available | Positive | 573863 - 573937 | Not Available |
| 3-deoxy-8-phosphooctulonate synthase | DSHI_RS02965 | Not Available | Negative | 574071 - 574904 | 29055.3 |
| capsule biosynthesis protein | DSHI_RS02970 | Not Available | Negative | 574921 - 576546 | 59598.3 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
