Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | DSHI_RS02775 | Not Available | Positive | 535489 - 536355 | 31877.0 |
| carbohydrate abc transporter permease | DSHI_RS02780 | Not Available | Positive | 536359 - 537177 | 30457.4 |
| sugar-binding transcriptional regulator | DSHI_RS02785 | Not Available | Positive | 537246 - 538217 | 35275.5 |
| nad(p)-dependent alcohol dehydrogenase | DSHI_RS02790 | Not Available | Positive | 538237 - 539280 | 36263.1 |
| sis domain-containing protein | DSHI_RS02795 | Not Available | Positive | 539277 - 539843 | 19720.3 |
| sdr family nad(p)-dependent oxidoreductase | DSHI_RS02800 | Not Available | Positive | 539847 - 540614 | 26961.4 |
| sdr family oxidoreductase | DSHI_RS02805 | Not Available | Positive | 541133 - 541858 | 25293.7 |
| fggy-family carbohydrate kinase | DSHI_RS02810 | Not Available | Positive | 541855 - 543489 | 56974.9 |
| hypothetical protein | DSHI_RS02815 | Not Available | Positive | 544002 - 544445 | 15795.2 |
| nucleoside diphosphate kinase regulator | DSHI_RS02820 | Not Available | Positive | 544496 - 544927 | 15830.2 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
