Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DSHI_RS02675 | Not Available | Negative | 512265 - 513269 | 34724.9 |
| abc transporter permease | DSHI_RS02680 | Not Available | Negative | 513283 - 514284 | 35329.3 |
| sugar abc transporter atp-binding protein | DSHI_RS02685 | Not Available | Negative | 514281 - 515777 | 53054.2 |
| autoinducer 2 abc transporter substrate-binding protein | DSHI_RS02690 | Not Available | Negative | 515852 - 516841 | 35063.3 |
| sugar-binding transcriptional regulator | DSHI_RS02695 | Not Available | Positive | 517065 - 518039 | 34212.4 |
| sugar phosphate isomerase/epimerase | DSHI_RS02700 | Not Available | Positive | 518075 - 518887 | 29290.1 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | DSHI_RS02705 | Not Available | Positive | 518910 - 519929 | 36552.4 |
| alpha-ketoacid dehydrogenase subunit beta | DSHI_RS02710 | Not Available | Positive | 519929 - 520912 | 35123.4 |
| acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit | DSHI_RS02715 | Not Available | Positive | 520939 - 522135 | 41266.3 |
| ribulokinase | DSHI_RS02720 | Not Available | Positive | 522165 - 523658 | 52774.8 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
