Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DSHI_RS02625 | Not Available | Negative | 502175 - 503185 | 35271.5 |
| sugar abc transporter atp-binding protein | DSHI_RS02630 | Not Available | Negative | 503182 - 504699 | 54146.7 |
| s-methyl-5-thioribose kinase | DSHI_RS02635 | Not Available | Positive | 504830 - 506089 | 46136.1 |
| s-methyl-5-thioribose-1-phosphate isomerase | DSHI_RS02640 | Not Available | Positive | 506086 - 507189 | 40041.5 |
| sugar-binding transcriptional regulator | DSHI_RS02645 | Not Available | Positive | 507253 - 508206 | 33882.9 |
| class ii aldolase/adducin family protein | DSHI_RS02650 | Not Available | Positive | 508203 - 508898 | 24956.7 |
| aldo/keto reductase | DSHI_RS02655 | Not Available | Positive | 508895 - 509974 | 40576.1 |
| aaa family atpase | DSHI_RS02660 | Not Available | Positive | 510058 - 510609 | 19942.8 |
| dihydroxyacetone kinase subunit l | DSHI_RS02665 | Not Available | Negative | 510637 - 511236 | 20949.1 |
| dihydroxyacetone kinase subunit dhak | DSHI_RS02670 | Not Available | Negative | 511233 - 512234 | 35171.3 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
