Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yban family protein | DSHI_RS21610 | Not Available | Positive | 475499 - 475996 | 17232.5 |
| abc transporter substrate-binding protein | DSHI_RS02505 | Not Available | Positive | 476139 - 477122 | 34060.2 |
| abc transporter permease | DSHI_RS02510 | Not Available | Positive | 477181 - 478005 | 28845.2 |
| abc transporter atp-binding protein | DSHI_RS02515 | Not Available | Positive | 478002 - 478751 | 26970.6 |
| nnrs family protein | DSHI_RS02520 | Not Available | Positive | 478748 - 480028 | 44302.9 |
| hypothetical protein | DSHI_RS02525 | Not Available | Positive | 480087 - 480497 | 14463.2 |
| 4fe-4s dicluster domain-containing protein | DSHI_RS02530 | Not Available | Negative | 480704 - 482722 | 69855.5 |
| biotin/lipoate--protein ligase family protein | DSHI_RS02535 | Not Available | Positive | 482843 - 483556 | 25426.2 |
| duf6505 family protein | DSHI_RS02540 | Not Available | Positive | 483553 - 484110 | 20191.7 |
| duf6352 family protein | DSHI_RS02545 | Not Available | Positive | 484107 - 485120 | 36966.5 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
