Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinoprotein relay system zinc metallohydrolase 2 | DSHI_RS02410 | Not Available | Positive | 456712 - 457557 | 30569.2 |
| hypothetical protein | DSHI_RS02415 | Not Available | Negative | 457583 - 458197 | 22751.3 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | DSHI_RS02420 | Not Available | Positive | 458365 - 459477 | 39402.4 |
| s-formylglutathione hydrolase | DSHI_RS02425 | Not Available | Positive | 459481 - 460308 | 30316.6 |
| cytochrome c family protein | DSHI_RS02430 | Not Available | Positive | 460328 - 460729 | 14252.2 |
| methanol/ethanol family pqq-dependent dehydrogenase | DSHI_RS02435 | Not Available | Positive | 460857 - 462659 | 65609.5 |
| c-type cytochrome, methanol metabolism-related | DSHI_RS02440 | Not Available | Positive | 462747 - 463289 | 19834.1 |
| substrate-binding domain-containing protein | DSHI_RS02445 | Not Available | Positive | 463273 - 464121 | 30553.9 |
| pqq-dependent catabolism-associated cxxcw motif protein | DSHI_RS02450 | Not Available | Positive | 464118 - 464666 | 20369.3 |
| hypothetical protein | DSHI_RS02455 | Not Available | Positive | 464927 - 465967 | 35473.6 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
