Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroloquinoline quinone precursor peptide pqqa | DSHI_RS02305 | Not Available | Positive | 438538 - 438636 | 3803.56 |
| pyrroloquinoline quinone biosynthesis protein pqqb | DSHI_RS02310 | Not Available | Positive | 438663 - 439556 | 31468.7 |
| pyrroloquinoline-quinone synthase pqqc | DSHI_RS02315 | Not Available | Positive | 439556 - 440308 | 28417.5 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | DSHI_RS02320 | Not Available | Positive | 440308 - 440583 | 10073.0 |
| pyrroloquinoline quinone biosynthesis protein pqqe | DSHI_RS02325 | Not Available | Positive | 440580 - 441686 | 40156.0 |
| hypothetical protein | DSHI_RS02330 | Not Available | Positive | 442029 - 442946 | 34175.4 |
| moxr family atpase | DSHI_RS02335 | Not Available | Positive | 443039 - 443995 | 34360.4 |
| duf58 domain-containing protein | DSHI_RS02340 | Not Available | Positive | 443992 - 444900 | 31796.0 |
| hypothetical protein | DSHI_RS02345 | Not Available | Positive | 444897 - 445268 | 12907.8 |
| vwa domain-containing protein | DSHI_RS02350 | Not Available | Positive | 445261 - 446223 | 33968.1 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
