Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase large subunit | DSHI_RS00010 | Not Available | Positive | 1782 - 6320 | 164098.0 |
| type ii toxin-antitoxin system antitoxin soca domain-containing protein | DSHI_RS21580 | Not Available | Positive | 6407 - 7018 | 22822.4 |
| log family protein | DSHI_RS00020 | Not Available | Negative | 7257 - 8114 | 31655.7 |
| hypothetical protein | DSHI_RS00025 | Not Available | Positive | 8295 - 8924 | 22188.4 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DSHI_RS00030 | Not Available | Positive | 9028 - 9855 | 29256.9 |
| hypothetical protein | DSHI_RS22165 | Not Available | Positive | 10220 - 10693 | 17443.9 |
| hypothetical protein | DSHI_RS00035 | Not Available | Positive | 10683 - 11255 | 20365.2 |
| cold-shock protein | DSHI_RS00040 | Not Available | Negative | 11747 - 11953 | 7172.36 |
| duf305 domain-containing protein | DSHI_RS00045 | Not Available | Negative | 12121 - 12642 | 18791.8 |
| hypothetical protein | DSHI_RS00050 | Not Available | Positive | 12777 - 13124 | 12547.7 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
