Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii crispr rna-guided endonuclease cas9 | DSHI_RS02050 | Not Available | Positive | 391798 - 395037 | 121635.0 |
| type ii crispr-associated endonuclease cas1 | DSHI_RS02055 | Not Available | Positive | 395098 - 396009 | 32066.9 |
| crispr-associated endonuclease cas2 | DSHI_RS02060 | Not Available | Positive | 396006 - 396350 | 13440.0 |
| is3 family transposase | DSHI_RS02070 | Not Available | Positive | 397989 - 399088 | 41592.3 |
| hypothetical protein | DSHI_RS02075 | Not Available | Negative | 399227 - 400612 | 50276.6 |
| hypothetical protein | DSHI_RS22480 | Not Available | Positive | 401392 - 401613 | 8528.47 |
| helix-turn-helix domain-containing protein | DSHI_RS02085 | Not Available | Positive | 402104 - 402430 | 11832.0 |
| imma/irre family metallo-endopeptidase | DSHI_RS02090 | Not Available | Positive | 402441 - 403163 | 27561.0 |
| hypothetical protein | DSHI_RS02095 | Not Available | Positive | 403268 - 403912 | 23745.9 |
| duf5666 domain-containing protein | DSHI_RS02100 | Not Available | Negative | 404246 - 405196 | 32896.5 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
