Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 379296 - 379372 | Not Available |
| duf4238 domain-containing protein | DSHI_RS02000 | Not Available | Positive | 379650 - 382190 | 97029.5 |
| hypothetical protein | DSHI_RS02005 | Not Available | Negative | 382289 - 383437 | 43203.5 |
| alpa family transcriptional regulator | DSHI_RS02010 | Not Available | Negative | 383697 - 383918 | 8370.9 |
| hypothetical protein | DSHI_RS02015 | Not Available | Negative | 383978 - 384760 | 29092.8 |
| site-specific integrase | DSHI_RS21605 | Not Available | Negative | 384765 - 385958 | 44887.0 |
| recombinase family protein | DSHI_RS02030 | Not Available | Negative | 386137 - 387774 | 60428.2 |
| tyrosine-type recombinase/integrase | DSHI_RS02035 | Not Available | Negative | 387910 - 388986 | 40642.9 |
| site-specific integrase | DSHI_RS02040 | Not Available | Negative | 388979 - 390658 | 63106.9 |
| helix-turn-helix domain-containing protein | DSHI_RS02045 | Not Available | Negative | 390817 - 391029 | 7833.58 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
