Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2933 domain-containing protein | DSHI_RS20405 | Not Available | Negative | 116938 - 117240 | 10832.4 |
| l,d-transpeptidase | DSHI_RS20410 | Not Available | Positive | 117396 - 117956 | 21229.2 |
| cytochrome c | DSHI_RS20415 | Not Available | Positive | 117985 - 118443 | 16185.3 |
| cytochrome c | DSHI_RS20420 | Not Available | Positive | 118813 - 119406 | 20625.7 |
| cytochrome c | DSHI_RS20425 | Not Available | Positive | 119409 - 120326 | 32427.9 |
| multicopper oxidase family protein | DSHI_RS20430 | Not Available | Positive | 120370 - 121764 | 51242.0 |
| cytochrome c | DSHI_RS20435 | Not Available | Positive | 121761 - 122243 | 17489.1 |
| dsba family protein | DSHI_RS20440 | Not Available | Positive | 122245 - 122976 | 27104.3 |
| heavy-metal-associated domain-containing protein | DSHI_RS22040 | Not Available | Negative | 123019 - 123219 | 6828.99 |
| heavy metal translocating p-type atpase | DSHI_RS20445 | Not Available | Positive | 123373 - 125883 | 86981.8 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
