Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | DSHI_RS20025 | Not Available | Positive | 37283 - 38371 | 39049.2 |
| type iv secretion system protein | DSHI_RS20030 | Not Available | Positive | 38371 - 39180 | 29019.3 |
| virb8 family protein | DSHI_RS20035 | Not Available | Positive | 39197 - 39850 | 24318.9 |
| trbg/virb9 family p-type conjugative transfer protein | DSHI_RS20040 | Not Available | Positive | 39853 - 40548 | 25543.2 |
| trbi/virb10 family protein | DSHI_RS20045 | Not Available | Positive | 40545 - 41924 | 49145.7 |
| atpase, t2ss/t4p/t4ss family | DSHI_RS20050 | Not Available | Positive | 41929 - 42915 | 35763.4 |
| duf4177 domain-containing protein | DSHI_RS20055 | Not Available | Positive | 42912 - 43106 | 7001.3 |
| hypothetical protein | DSHI_RS20060 | Not Available | Positive | 43103 - 43513 | 15390.1 |
| type iv secretion system protein | DSHI_RS20065 | Not Available | Positive | 43526 - 44602 | 37335.1 |
| aaa family atpase | DSHI_RS20070 | Not Available | Negative | 44763 - 46667 | 71618.8 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
