Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | DSHI_RS19980 | Not Available | Positive | 30885 - 31736 | 30000.5 |
| hypothetical protein | DSHI_RS19985 | Not Available | Negative | 31897 - 32124 | 8179.49 |
| helix-turn-helix domain-containing protein | DSHI_RS19990 | Not Available | Negative | 32292 - 32549 | 9414.34 |
| hypothetical protein | DSHI_RS19995 | Not Available | Negative | 32674 - 32922 | 9455.02 |
| hypothetical protein | DSHI_RS20000 | Not Available | Positive | 33138 - 33491 | 13078.5 |
| lytic transglycosylase domain-containing protein | DSHI_RS22005 | Not Available | Positive | 33535 - 34149 | 21690.6 |
| trbc/virb2 family protein | DSHI_RS20010 | Not Available | Positive | 34146 - 34439 | 10014.6 |
| type iv secretion system protein virb3 | DSHI_RS20015 | Not Available | Positive | 34432 - 34710 | 10318.9 |
| type iv secretion system dna-binding domain-containing protein | DSHI_RS20020 | Not Available | Positive | 34700 - 37063 | 88038.9 |
| hypothetical protein | DSHI_RS22655 | Not Available | Positive | 37060 - 37227 | 5771.89 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
