Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin domain-containing protein | DSHI_RS19935 | Not Available | Negative | 24317 - 24976 | 23443.1 |
| disulfide bond formation protein b | DSHI_RS19940 | Not Available | Negative | 24973 - 25395 | 15012.9 |
| sco family protein | DSHI_RS19945 | Not Available | Negative | 25401 - 25967 | 20743.5 |
| helix-turn-helix domain-containing protein | DSHI_RS19950 | Not Available | Positive | 26181 - 26609 | 16019.2 |
| cation transporter | DSHI_RS19955 | Not Available | Positive | 26692 - 27312 | 21815.3 |
| transglutaminase family protein | DSHI_RS19960 | Not Available | Positive | 27382 - 27945 | 21311.6 |
| cation diffusion facilitator family transporter | DSHI_RS19965 | Not Available | Positive | 27935 - 28900 | 35211.5 |
| stas/sec14 domain-containing protein | DSHI_RS19970 | Not Available | Positive | 28872 - 29183 | 11481.7 |
| hypothetical protein | DSHI_RS22000 | Not Available | Positive | 29770 - 30282 | 19179.1 |
| helix-turn-helix transcriptional regulator | DSHI_RS19975 | Not Available | Negative | 30471 - 30821 | 12839.2 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
