Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1289 domain-containing protein | DSHI_RS21195 | Not Available | Negative | 71161 - 71427 | 9811.35 |
| hemin uptake protein hemp | DSHI_RS22125 | Not Available | Negative | 71437 - 71592 | 5848.14 |
| rhodanese-like domain-containing protein | DSHI_RS21200 | Not Available | Positive | 71714 - 72295 | 21097.4 |
| maue/doxx family redox-associated membrane protein | DSHI_RS19805 | Not Available | Negative | 12 - 776 | 28507.6 |
| duf305 domain-containing protein | DSHI_RS19810 | Not Available | Negative | 789 - 1625 | 30278.4 |
| l,d-transpeptidase | DSHI_RS23025 | Not Available | Positive | 1805 - 2386 | 21986.5 |
| multicopper oxidase family protein | DSHI_RS19820 | Not Available | Positive | 2512 - 3774 | 45526.1 |
| disulfide bond formation protein b | DSHI_RS19825 | Not Available | Positive | 3888 - 4400 | 17860.1 |
| l,d-transpeptidase | DSHI_RS19830 | Not Available | Positive | 4443 - 5108 | 24326.7 |
| hypothetical protein | DSHI_RS19835 | Not Available | Negative | 5185 - 6078 | 32097.3 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
