Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication initiation protein | DSHI_RS21145 | Not Available | Positive | 61901 - 63073 | 43328.8 |
| duf3047 domain-containing protein | DSHI_RS21150 | Not Available | Positive | 63131 - 63772 | 22552.6 |
| aarf/abc1/ubib kinase family protein | DSHI_RS21155 | Not Available | Positive | 63812 - 65134 | 48457.0 |
| laci family dna-binding transcriptional regulator | DSHI_RS21160 | Not Available | Negative | 65138 - 66145 | 35142.3 |
| tripartite tricarboxylate transporter substrate binding protein | DSHI_RS21165 | Not Available | Positive | 66272 - 67225 | 33086.2 |
| tripartite tricarboxylate transporter tctb family protein | DSHI_RS21170 | Not Available | Positive | 67292 - 67747 | 16011.7 |
| tripartite tricarboxylate transporter permease | DSHI_RS21175 | Not Available | Positive | 67749 - 69233 | 50584.7 |
| l-threonate dehydrogenase | DSHI_RS21180 | Not Available | Positive | 69235 - 70116 | 29683.8 |
| hypothetical protein | DSHI_RS21185 | Not Available | Positive | 70201 - 70617 | 15432.5 |
| dps family protein | DSHI_RS21190 | Not Available | Positive | 70690 - 71160 | 17051.1 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
