Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltransferase family protein | DSHI_RS21045 | Not Available | Negative | 40279 - 41874 | 55512.9 |
| tripartite tricarboxylate transporter permease | DSHI_RS21050 | Not Available | Negative | 41874 - 43385 | 52112.2 |
| tripartite tricarboxylate transporter tctb family protein | DSHI_RS21055 | Not Available | Negative | 43389 - 43895 | 18150.9 |
| tripartite tricarboxylate transporter substrate binding protein | DSHI_RS21060 | Not Available | Negative | 43895 - 44845 | 33231.5 |
| lysr family transcriptional regulator | DSHI_RS21065 | Not Available | Positive | 44991 - 45887 | 31752.9 |
| tetr/acrr family transcriptional regulator | DSHI_RS21070 | Not Available | Negative | 45953 - 46597 | 24324.2 |
| xanthine dehydrogenase family protein subunit m | DSHI_RS21075 | Not Available | Positive | 46743 - 47576 | 28499.2 |
| (2fe-2s)-binding protein | DSHI_RS21080 | Not Available | Positive | 47573 - 48073 | 17504.9 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | DSHI_RS21085 | Not Available | Positive | 48070 - 50451 | 84560.1 |
| c4-dicarboxylate trap transporter substrate-binding protein | DSHI_RS21090 | Not Available | Positive | 50499 - 51551 | 38270.0 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
