Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | DSHI_RS01790 | Not Available | Negative | 340107 - 340445 | 12403.9 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | DSHI_RS01795 | Not Available | Positive | 340610 - 342199 | 55303.9 |
| signal peptidase ii | DSHI_RS01800 | Not Available | Positive | 342204 - 342680 | 16840.9 |
| duf3035 domain-containing protein | DSHI_RS01805 | Not Available | Positive | 342734 - 343279 | 19100.4 |
| pitrilysin family protein | DSHI_RS01810 | Not Available | Positive | 343363 - 344724 | 49929.7 |
| pitrilysin family protein | DSHI_RS01815 | Not Available | Positive | 344721 - 346034 | 46887.2 |
| dna mismatch repair endonuclease mutl | DSHI_RS01820 | Not Available | Positive | 346074 - 347939 | 66231.4 |
| dna recombination protein rmuc | DSHI_RS01825 | Not Available | Positive | 347936 - 349168 | 44287.5 |
| chrr family anti-sigma-e factor | DSHI_RS01830 | Not Available | Negative | 349194 - 349865 | 23590.3 |
| sigma-70 family rna polymerase sigma factor | DSHI_RS01835 | Not Available | Negative | 349872 - 350417 | 20983.4 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
