Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Terminase large subunit | DSHI_RS11085 | Not Available | Negative | 2304797 - 2306161 | 49592.9 |
| Baseplate wedge subunit | DSHI_RS12515 | Not Available | Negative | 2612167 - 2612616 | 16437.6 |
| Baseplate puncturing device | DSHI_RS12520 | Not Available | Negative | 2612621 - 2612920 | 9667.07 |
| Hypothetical protein | DSHI_RS12525 | Not Available | Negative | 2612931 - 2614718 | 61832.0 |
| hypothetical protein | DSHI_RS12530 | Not Available | Negative | 2614711 - 2615373 | 24120.4 |
| duf5908 family protein | DSHI_RS22345 | Not Available | Negative | 2615384 - 2615557 | 6403.73 |
| Putative tail tube protein 2 | DSHI_RS12535 | Not Available | Negative | 2615591 - 2616073 | 17513.2 |
| Tail protein | DSHI_RS12540 | Not Available | Negative | 2616086 - 2616544 | 16834.1 |
| Putative tail sheath protein | DSHI_RS12545 | Not Available | Negative | 2616568 - 2618061 | 54585.1 |
| nad(p)-dependent oxidoreductase | DSHI_RS00005 | Not Available | Positive | 128 - 1567 | 52107.6 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
