Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | DSHI_RS19040 | Not Available | Positive | 171229 - 171951 | 26586.2 |
| atp-binding protein | DSHI_RS19045 | Not Available | Positive | 171951 - 173417 | 53597.4 |
| shoct domain-containing protein | DSHI_RS22870 | Not Available | Positive | 173353 - 173658 | 11233.6 |
| heme lyase ccmf/nrfe family subunit | DSHI_RS19055 | Not Available | Positive | 173724 - 175724 | 72131.6 |
| dsbe family thiol:disulfide interchange protein | DSHI_RS19060 | Not Available | Positive | 175733 - 176299 | 20322.3 |
| cytochrome c-type biogenesis protein | DSHI_RS19065 | Not Available | Positive | 176296 - 176769 | 17477.9 |
| c-type cytochrome biogenesis protein ccmi | DSHI_RS19070 | Not Available | Positive | 176766 - 177917 | 41689.6 |
| protein-disulfide reductase dsbd | DSHI_RS19075 | Not Available | Negative | 177946 - 180075 | 75444.2 |
| duf2933 domain-containing protein | DSHI_RS19080 | Not Available | Negative | 180359 - 180661 | 10832.4 |
| l,d-transpeptidase | DSHI_RS19085 | Not Available | Positive | 180817 - 181377 | 21229.2 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
