Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa transferase | DSHI_RS18380 | Not Available | Positive | 33247 - 35727 | 89512.7 |
| n,n-dimethylformamidase beta subunit family domain-containing protein | DSHI_RS18385 | Not Available | Positive | 35848 - 37389 | 56818.7 |
| hypothetical protein | DSHI_RS18390 | Not Available | Negative | 37539 - 37766 | 8313.83 |
| helix-turn-helix transcriptional regulator | DSHI_RS18395 | Not Available | Negative | 37936 - 38193 | 9197.11 |
| hypothetical protein | DSHI_RS22840 | Not Available | Negative | 38318 - 38578 | 9903.48 |
| hypothetical protein | DSHI_RS18405 | Not Available | Positive | 38780 - 39133 | 13048.5 |
| lytic transglycosylase domain-containing protein | DSHI_RS18410 | Not Available | Positive | 39177 - 39797 | 22240.1 |
| trbc/virb2 family protein | DSHI_RS18415 | Not Available | Positive | 39794 - 40087 | 10048.6 |
| type iv secretion system protein virb3 | DSHI_RS18420 | Not Available | Positive | 40080 - 40358 | 10334.9 |
| type iv secretion system dna-binding domain-containing protein | DSHI_RS18425 | Not Available | Positive | 40348 - 42723 | 88310.0 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
