Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | DSHI_RS18330 | Not Available | Negative | 24620 - 25186 | 20743.5 |
| helix-turn-helix domain-containing protein | DSHI_RS18335 | Not Available | Positive | 25400 - 25828 | 16019.2 |
| cation transporter | DSHI_RS18340 | Not Available | Positive | 25911 - 26531 | 21815.3 |
| transglutaminase family protein | DSHI_RS18345 | Not Available | Positive | 26601 - 27164 | 21311.6 |
| cation diffusion facilitator family transporter | DSHI_RS18350 | Not Available | Positive | 27154 - 28119 | 35211.5 |
| stas/sec14 domain-containing protein | DSHI_RS18355 | Not Available | Positive | 28091 - 28402 | 11481.7 |
| hypothetical protein | DSHI_RS18360 | Not Available | Positive | 28990 - 29451 | 17519.1 |
| site-specific integrase | DSHI_RS18365 | Not Available | Positive | 29691 - 30563 | 32841.1 |
| is91 family transposase | DSHI_RS18370 | Not Available | Positive | 30576 - 31778 | 44579.0 |
| glxa family transcriptional regulator | DSHI_RS18375 | Not Available | Negative | 32223 - 33146 | 33989.0 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
