Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-homoserine-lactone synthase | DSHI_RS22115 | Not Available | Negative | 84463 - 85098 | 24413.3 |
| is481 family transposase | DSHI_RS22120 | Not Available | Negative | 85241 - 86179 | 36223.6 |
| duf305 domain-containing protein | DSHI_RS18195 | Not Available | Negative | 8 - 844 | 30278.4 |
| l,d-transpeptidase | DSHI_RS23010 | Not Available | Positive | 1024 - 1605 | 21986.5 |
| multicopper oxidase family protein | DSHI_RS18205 | Not Available | Positive | 1731 - 2993 | 45526.1 |
| disulfide bond formation protein b | DSHI_RS18210 | Not Available | Positive | 3107 - 3619 | 17860.1 |
| l,d-transpeptidase | DSHI_RS18215 | Not Available | Positive | 3662 - 4327 | 24326.7 |
| hypothetical protein | DSHI_RS18220 | Not Available | Negative | 4404 - 5297 | 32097.3 |
| ef-hand domain-containing protein | DSHI_RS18225 | Not Available | Positive | 5359 - 5967 | 21121.6 |
| duf302 domain-containing protein | DSHI_RS18230 | Not Available | Positive | 6108 - 6494 | 13989.9 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
