Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is481 family transposase | DSHI_RS22105 | Not Available | Negative | 64749 - 65588 | 30485.5 |
| glucuronosyltransferase | DSHI_RS20745 | Not Available | Positive | 65809 - 66255 | 16207.7 |
| glycosyltransferase | DSHI_RS20750 | Not Available | Positive | 66252 - 66728 | 16961.6 |
| coenzyme f420 hydrogenase/dehydrogenase, beta subunit c-terminal domain | DSHI_RS20755 | Not Available | Positive | 66739 - 68040 | 45730.9 |
| polysaccharide pyruvyl transferase family protein | DSHI_RS20760 | Not Available | Positive | 68033 - 69217 | 42609.8 |
| o-antigen ligase | DSHI_RS20765 | Not Available | Negative | 69126 - 70604 | 54594.0 |
| nodz family protein | DSHI_RS20770 | Not Available | Negative | 70715 - 71707 | 36102.2 |
| gdp-mannose 4,6-dehydratase | DSHI_RS20775 | Not Available | Negative | 71700 - 72767 | 40288.3 |
| sulfotransferase domain-containing protein | DSHI_RS20780 | Not Available | Negative | 72811 - 73629 | 31685.1 |
| fkbm family methyltransferase | DSHI_RS20785 | Not Available | Negative | 73755 - 74459 | 26603.7 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
