Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DSHI_RS20645 | Not Available | Positive | 42019 - 44979 | 108134.0 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | DSHI_RS20650 | Not Available | Positive | 45616 - 45843 | 8484.14 |
| type ii toxin-antitoxin system death-on-curing family toxin | DSHI_RS20655 | Not Available | Positive | 45840 - 46232 | 13790.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DSHI_RS20660 | Not Available | Positive | 46419 - 46973 | 20228.7 |
| dtdp-glucose 4,6-dehydratase | DSHI_RS20665 | Not Available | Positive | 46978 - 48018 | 38217.9 |
| sulfotransferase family 2 domain-containing protein | DSHI_RS21565 | Not Available | Positive | 48022 - 48855 | 30925.9 |
| dtdp-4-dehydrorhamnose reductase | DSHI_RS20675 | Not Available | Positive | 48852 - 49709 | 29080.3 |
| glucose-1-phosphate thymidylyltransferase rfba | DSHI_RS20680 | Not Available | Positive | 49744 - 50616 | 31517.7 |
| nad(p)-dependent oxidoreductase | DSHI_RS20685 | Not Available | Positive | 50748 - 51629 | 29652.0 |
| sugar transferase | DSHI_RS20690 | Not Available | Positive | 51626 - 52234 | 22249.3 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
