Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase subunit beta | DSHI_RS17600 | Not Available | Negative | 3660122 - 3660859 | 27145.6 |
| 4-carboxymuconolactone decarboxylase | DSHI_RS17605 | Not Available | Negative | 3660856 - 3661242 | 13973.7 |
| 4-hydroxybenzoate 3-monooxygenase | DSHI_RS17610 | Not Available | Negative | 3661252 - 3662421 | 43662.8 |
| winged helix-turn-helix domain-containing protein | DSHI_RS17615 | Not Available | Positive | 3662578 - 3662931 | 12159.5 |
| molybdate abc transporter substrate-binding protein | DSHI_RS17620 | Not Available | Positive | 3662924 - 3663676 | 26157.1 |
| molybdate abc transporter permease subunit | DSHI_RS17625 | Not Available | Positive | 3663669 - 3664367 | 24594.7 |
| molybdenum abc transporter atp-binding protein | DSHI_RS17630 | Not Available | Positive | 3664364 - 3665446 | 38473.9 |
| hpt domain-containing protein | DSHI_RS17635 | Not Available | Negative | 3665477 - 3665809 | 11814.9 |
| pp2c family protein-serine/threonine phosphatase | DSHI_RS17640 | Not Available | Positive | 3665977 - 3667233 | 45299.1 |
| nudix hydrolase | DSHI_RS17645 | Not Available | Negative | 3667262 - 3667714 | 16838.4 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
