Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent malic enzyme | DSHI_RS17550 | Not Available | Positive | 3648901 - 3651159 | 80509.9 |
| peptide-methionine (s)-s-oxide reductase msra | DSHI_RS17555 | Not Available | Negative | 3651291 - 3651971 | 24334.9 |
| hypothetical protein | DSHI_RS17560 | Not Available | Positive | 3652180 - 3652893 | 25992.2 |
| m48 family metallopeptidase | DSHI_RS17565 | Not Available | Negative | 3652890 - 3653921 | 36612.1 |
| yjgn family protein | DSHI_RS17570 | Not Available | Negative | 3653928 - 3654965 | 38591.6 |
| argininosuccinate synthase | DSHI_RS17575 | Not Available | Negative | 3655044 - 3656264 | 44779.1 |
| threonine ammonia-lyase ilva | DSHI_RS17580 | Not Available | Positive | 3656372 - 3657613 | 45049.1 |
| 3-carboxy-cis,cis-muconate cycloisomerase | DSHI_RS17585 | Not Available | Positive | 3657613 - 3658659 | 36882.6 |
| 3-keto-5-aminohexanoate cleavage protein | DSHI_RS17590 | Not Available | Negative | 3658656 - 3659495 | 30401.2 |
| protocatechuate 3,4-dioxygenase subunit alpha | DSHI_RS17595 | Not Available | Negative | 3659505 - 3660119 | 22187.2 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
