Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export chaperone secb | DSHI_RS17455 | Not Available | Positive | 3630144 - 3630662 | 19183.1 |
| dna polymerase iii subunit epsilon | DSHI_RS17460 | Not Available | Negative | 3630667 - 3631359 | 25228.0 |
| dephospho-coa kinase | DSHI_RS17465 | Not Available | Negative | 3631352 - 3631948 | 21353.8 |
| shikimate dehydrogenase | DSHI_RS17470 | Not Available | Negative | 3631945 - 3632781 | 29781.8 |
| nucleoside triphosphate pyrophosphatase | DSHI_RS17475 | Not Available | Negative | 3632778 - 3633374 | 21722.2 |
| protoporphyrinogen oxidase hemj | DSHI_RS17480 | Not Available | Positive | 3633757 - 3634194 | 16767.0 |
| transcription termination factor rho | DSHI_RS17485 | Not Available | Positive | 3634311 - 3635582 | 47122.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DSHI_RS21875 | Not Available | Positive | 3635603 - 3636892 | 45893.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DSHI_RS17500 | Not Available | Positive | 3636905 - 3638764 | 67317.8 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DSHI_RS21880 | Not Available | Positive | 3638775 - 3639362 | 21574.9 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
