Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter substrate-binding protein | DSHI_RS17205 | Not Available | Negative | 3575429 - 3576475 | 38360.4 |
| is630 family transposase | DSHI_RS22630 | Not Available | Negative | 3576583 - 3577158 | 21746.2 |
| transposase | DSHI_RS22635 | Not Available | Negative | 3577175 - 3577537 | 13200.2 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | DSHI_RS17220 | Not Available | Negative | 3577798 - 3578496 | 25280.4 |
| isoprenylcysteine carboxylmethyltransferase family protein | DSHI_RS17225 | Not Available | Negative | 3578510 - 3579277 | 28408.9 |
| m10 family metallopeptidase | DSHI_RS17230 | Not Available | Negative | 3579372 - 3580826 | 52121.6 |
| amp-binding protein | DSHI_RS17235 | Not Available | Negative | 3580985 - 3582724 | 62706.9 |
| heavy-metal-associated domain-containing protein | DSHI_RS17240 | Not Available | Positive | 3582945 - 3583157 | 7425.87 |
| dsba family protein | DSHI_RS17245 | Not Available | Negative | 3583162 - 3583884 | 26004.9 |
| l,d-transpeptidase | DSHI_RS17250 | Not Available | Positive | 3584144 - 3584692 | 20668.1 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
