Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-related sulfurtransferase | DSHI_RS16970 | Not Available | Positive | 3516094 - 3516993 | 33422.0 |
| trna 2-selenouridine(34) synthase mnmh | DSHI_RS16975 | Not Available | Positive | 3517036 - 3518097 | 38074.7 |
| selenide, water dikinase seld | DSHI_RS16980 | Not Available | Negative | 3518104 - 3520233 | 74019.6 |
| alpha/beta hydrolase | DSHI_RS16985 | Not Available | Positive | 3520331 - 3521806 | 52015.1 |
| pyridoxamine 5'-phosphate oxidase family protein | DSHI_RS21840 | Not Available | Negative | 3521817 - 3522377 | 20476.7 |
| lipocalin-like domain-containing protein | DSHI_RS16990 | Not Available | Negative | 3522370 - 3523434 | 39048.1 |
| ftsx-like permease family protein | DSHI_RS16995 | Not Available | Negative | 3523424 - 3525826 | 84910.4 |
| abc transporter atp-binding protein | DSHI_RS17000 | Not Available | Negative | 3525826 - 3526482 | 23158.0 |
| dna topoisomerase (atp-hydrolyzing) subunit b | DSHI_RS17005 | Not Available | Positive | 3526685 - 3529102 | 88665.2 |
| topoisomerase dna-binding c4 zinc finger domain-containing protein | DSHI_RS23060 | Not Available | Negative | 3529349 - 3529741 | 14320.3 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
