Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase y family protein | DSHI_RS16370 | Not Available | Positive | 3399663 - 3401321 | 59580.3 |
| duf2794 domain-containing protein | DSHI_RS16375 | Not Available | Positive | 3401706 - 3402056 | 13342.5 |
| c40 family peptidase | DSHI_RS16380 | Not Available | Negative | 3402060 - 3402899 | 29209.7 |
| m17 family metallopeptidase | DSHI_RS16385 | Not Available | Negative | 3402896 - 3404287 | 48369.2 |
| hypothetical protein | DSHI_RS16390 | Not Available | Negative | 3404838 - 3405260 | 15161.3 |
| carbonic anhydrase | DSHI_RS16395 | Not Available | Positive | 3405407 - 3406057 | 23916.3 |
| sodium-dependent bicarbonate transport family permease | DSHI_RS16400 | Not Available | Positive | 3406143 - 3407117 | 32777.8 |
| p-ii family nitrogen regulator | DSHI_RS16405 | Not Available | Positive | 3407128 - 3407439 | 11129.7 |
| hypothetical protein | DSHI_RS16410 | Not Available | Positive | 3407481 - 3407954 | 17663.1 |
| aspartate-semialdehyde dehydrogenase | DSHI_RS16415 | Not Available | Negative | 3407961 - 3408983 | 37513.9 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
