Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated endoribonuclease cas2e | DSHI_RS16325 | Not Available | Positive | 3389862 - 3390155 | 10667.2 |
| helix-turn-helix domain-containing protein | DSHI_RS16330 | Not Available | Positive | 3392485 - 3392688 | 7600.09 |
| helix-turn-helix domain-containing protein | DSHI_RS16335 | Not Available | Positive | 3392688 - 3393194 | 19068.3 |
| site-specific integrase | DSHI_RS16340 | Not Available | Positive | 3393172 - 3394230 | 39769.3 |
| 7-cyano-7-deazaguanine synthase | DSHI_RS16345 | Not Available | Negative | 3394234 - 3395673 | 52853.3 |
| hypothetical protein | DSHI_RS22825 | Not Available | Negative | 3395713 - 3396024 | 10957.2 |
| hypothetical protein | DSHI_RS16350 | Not Available | Negative | 3396008 - 3396778 | 28143.3 |
| Trna-lys | Not Available | Not Available | Positive | 3396915 - 3396990 | Not Available |
| diaminopimelate epimerase | DSHI_RS16360 | Not Available | Positive | 3397087 - 3397935 | 30239.0 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DSHI_RS16365 | Not Available | Positive | 3397932 - 3399182 | 46005.6 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
