Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | DSHI_RS16275 | Not Available | Negative | 3377373 - 3377993 | 22186.2 |
| sulfite dehydrogenase | DSHI_RS16280 | Not Available | Negative | 3377980 - 3379251 | 46649.2 |
| site-specific integrase | DSHI_RS16285 | Not Available | Positive | 3379874 - 3381040 | 43754.4 |
| crispr-associated helicase/endonuclease cas3 | DSHI_RS16290 | Not Available | Negative | 3381532 - 3384084 | 90294.1 |
| hypothetical protein | DSHI_RS16295 | Not Available | Positive | 3384283 - 3385797 | 54858.8 |
| type i-e crispr-associated protein cse2/casb | DSHI_RS21485 | Not Available | Positive | 3385790 - 3386365 | 20548.8 |
| type i-e crispr-associated protein cas7/cse4/casc | DSHI_RS16305 | Not Available | Positive | 3386358 - 3387479 | 39375.5 |
| type i-e crispr-associated protein cas5/casd | DSHI_RS16310 | Not Available | Positive | 3387476 - 3388162 | 24816.6 |
| type i-e crispr-associated protein cas6/cse3/case | DSHI_RS16315 | Not Available | Positive | 3388159 - 3388950 | 28450.3 |
| type i-e crispr-associated endonuclease cas1e | DSHI_RS16320 | Not Available | Positive | 3388955 - 3389830 | 31444.1 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
