Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | DSHI_RS15975 | Not Available | Positive | 3316997 - 3317893 | 32629.2 |
| putative hydro-lyase | DSHI_RS15980 | Not Available | Positive | 3317939 - 3318841 | 32828.3 |
| trap transporter substrate-binding protein | DSHI_RS15985 | Not Available | Positive | 3318825 - 3319859 | 36157.7 |
| trap transporter small permease subunit | DSHI_RS15990 | Not Available | Positive | 3319882 - 3320430 | 19928.6 |
| trap transporter large permease | DSHI_RS15995 | Not Available | Positive | 3320427 - 3321716 | 44931.4 |
| duf2848 domain-containing protein | DSHI_RS16000 | Not Available | Positive | 3321720 - 3322373 | 23058.7 |
| trap transporter substrate-binding protein dctp | DSHI_RS16005 | Not Available | Positive | 3322458 - 3323468 | 36474.0 |
| trap transporter small permease | DSHI_RS16010 | Not Available | Positive | 3323471 - 3323968 | 18188.1 |
| trap transporter large permease | DSHI_RS16015 | Not Available | Positive | 3323968 - 3325263 | 44469.4 |
| hypothetical protein | DSHI_RS16020 | Not Available | Negative | 3325448 - 3325705 | 8584.96 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
