Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1674 domain-containing protein | DSHI_RS15395 | Not Available | Positive | 3202651 - 3202875 | 8127.45 |
| hypothetical protein | DSHI_RS15400 | Not Available | Negative | 3202894 - 3203289 | 14339.1 |
| efflux rnd transporter permease subunit | DSHI_RS15405 | Not Available | Negative | 3203392 - 3206619 | 115068.0 |
| efflux rnd transporter periplasmic adaptor subunit | DSHI_RS15410 | Not Available | Negative | 3206616 - 3207824 | 41798.1 |
| tetr/acrr family transcriptional regulator | DSHI_RS15415 | Not Available | Positive | 3207995 - 3208633 | 23742.9 |
| bluf domain-containing protein | DSHI_RS15420 | Not Available | Negative | 3208637 - 3209044 | 14980.9 |
| 4-hydroxy-tetrahydrodipicolinate reductase | DSHI_RS15425 | Not Available | Negative | 3209163 - 3209972 | 27621.9 |
| 30s ribosome-binding factor rbfa | DSHI_RS15430 | Not Available | Positive | 3210091 - 3210498 | 15421.2 |
| trna pseudouridine(55) synthase trub | DSHI_RS15435 | Not Available | Positive | 3210502 - 3211416 | 32458.3 |
| duf1294 domain-containing protein | DSHI_RS15440 | Not Available | Positive | 3211416 - 3211694 | 9919.58 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
