Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiosulfate oxidation carrier protein soxy | DSHI_RS14245 | Not Available | Negative | 2964907 - 2965323 | 13476.2 |
| sulfur oxidation c-type cytochrome soxx | DSHI_RS14250 | Not Available | Negative | 2965359 - 2965841 | 16982.3 |
| thioredoxin family protein | DSHI_RS14255 | Not Available | Negative | 2965958 - 2966524 | 21129.3 |
| cytochrome c biogenesis ccda family protein | DSHI_RS14260 | Not Available | Negative | 2966552 - 2967286 | 26219.1 |
| thioredoxin family protein | DSHI_RS14265 | Not Available | Positive | 2967374 - 2967775 | 14659.8 |
| heme-binding protein | DSHI_RS14270 | Not Available | Positive | 2967772 - 2968284 | 17270.5 |
| helix-turn-helix transcriptional regulator | DSHI_RS14275 | Not Available | Positive | 2968306 - 2968641 | 12336.9 |
| yeee/yede family protein | DSHI_RS14280 | Not Available | Positive | 2968662 - 2969750 | 36731.4 |
| ggdef domain-containing protein | DSHI_RS14285 | Not Available | Negative | 2969763 - 2970803 | 38299.1 |
| heme no-binding domain-containing protein | DSHI_RS14290 | Not Available | Negative | 2970800 - 2971384 | 21520.7 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
