Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase type ii | DSHI_RS13710 | Not Available | Positive | 2860992 - 2861681 | 24897.6 |
| alpha/beta fold hydrolase | DSHI_RS13715 | Not Available | Positive | 2861681 - 2862505 | 29382.3 |
| threonine/serine dehydratase | DSHI_RS13720 | Not Available | Positive | 2862502 - 2863494 | 33686.6 |
| hypothetical protein | DSHI_RS13725 | Not Available | Negative | 2863568 - 2863975 | 14770.5 |
| hydroxymethylbilane synthase | DSHI_RS13730 | Not Available | Negative | 2864136 - 2865092 | 34017.6 |
| uroporphyrinogen decarboxylase | DSHI_RS13735 | Not Available | Positive | 2865197 - 2866231 | 37489.9 |
| mfs transporter | DSHI_RS13740 | Not Available | Positive | 2866405 - 2867619 | 42324.6 |
| methionine--trna ligase | DSHI_RS13745 | Not Available | Positive | 2867674 - 2869392 | 63438.3 |
| response regulator | DSHI_RS13750 | Not Available | Positive | 2869501 - 2871093 | 57650.0 |
| peptide-methionine (r)-s-oxide reductase msrb | DSHI_RS13755 | Not Available | Negative | 2871102 - 2871578 | 17347.7 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
