Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | DSHI_RS22805 | Not Available | Positive | 2656903 - 2657718 | 29771.2 |
| type i secretion system permease/atpase | DSHI_RS12720 | Not Available | Positive | 2657746 - 2659947 | 77646.8 |
| hlyd family type i secretion periplasmic adaptor subunit | DSHI_RS12725 | Not Available | Positive | 2659944 - 2661263 | 47769.1 |
| cadherin-like domain-containing protein | DSHI_RS12730 | Not Available | Negative | 2661268 - 2668611 | 250253.0 |
| duf3987 domain-containing protein | DSHI_RS12735 | Not Available | Positive | 2668891 - 2670234 | 49216.0 |
| hypothetical protein | DSHI_RS12740 | Not Available | Negative | 2670313 - 2670720 | 15397.5 |
| hypothetical protein | DSHI_RS12745 | Not Available | Negative | 2670795 - 2671211 | 15089.0 |
| is3-like element isdsh2 family transposase | DSHI_RS12760 | Not Available | Positive | 2672204 - 2673315 | 43276.3 |
| beta-1,6-n-acetylglucosaminyltransferase | DSHI_RS12765 | Not Available | Negative | 2673342 - 2674324 | 34812.4 |
| tyrosine-type recombinase/integrase | DSHI_RS22810 | Not Available | Negative | 2674585 - 2675121 | 20707.2 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
