Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | DSHI_RS12490 | Not Available | Negative | 2598687 - 2600072 | 49670.0 |
| contractile injection system tape measure protein | DSHI_RS12495 | Not Available | Negative | 2600009 - 2602447 | 83158.6 |
| hypothetical protein | DSHI_RS12500 | Not Available | Negative | 2604619 - 2607219 | 94147.9 |
| hypothetical protein | DSHI_RS12505 | Not Available | Negative | 2607235 - 2608275 | 36668.2 |
| baseplate j/gp47 family protein | DSHI_RS12510 | Not Available | Negative | 2608289 - 2612149 | 138170.0 |
| hypothetical protein | DSHI_RS12550 | Not Available | Negative | 2618145 - 2619143 | 33660.8 |
| hypothetical protein | DSHI_RS12555 | Not Available | Positive | 2619550 - 2620425 | 31021.0 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DSHI_RS12560 | Not Available | Negative | 2620435 - 2621520 | 38834.3 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DSHI_RS12565 | Not Available | Negative | 2621533 - 2622972 | 49051.1 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DSHI_RS12570 | Not Available | Negative | 2622969 - 2624450 | 51590.5 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
