Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | DSHI_RS12440 | Not Available | Negative | 2588300 - 2589013 | 26146.9 |
| dihydrodipicolinate synthase family protein | DSHI_RS12445 | Not Available | Negative | 2589015 - 2589926 | 32691.8 |
| l-rhamnonate dehydratase | DSHI_RS12450 | Not Available | Negative | 2589923 - 2591098 | 43858.5 |
| tripartite tricarboxylate transporter permease | DSHI_RS12455 | Not Available | Negative | 2591102 - 2592598 | 53097.2 |
| tripartite tricarboxylate transporter tctb family protein | DSHI_RS12460 | Not Available | Negative | 2592604 - 2593044 | 16449.9 |
| tripartite tricarboxylate transporter substrate binding protein | DSHI_RS12465 | Not Available | Negative | 2593114 - 2594058 | 32923.2 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DSHI_RS12470 | Not Available | Negative | 2594434 - 2595828 | 48551.7 |
| glycoside hydrolase family 25 protein | DSHI_RS21415 | Not Available | Negative | 2596056 - 2596997 | 33275.0 |
| hypothetical protein | DSHI_RS12480 | Not Available | Negative | 2597049 - 2598080 | 36382.8 |
| duf4255 domain-containing protein | DSHI_RS12485 | Not Available | Negative | 2598124 - 2598690 | 20450.4 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
