Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Dinoroseobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Dinoroseobacter |
| Species | Dinoroseobacter shibae |
| Strain | DFL 12 = DSM 16493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 33 |
| Temperature range | Mesophilic |
| Habitat | Fresh water |
| Biotic relationship | Free living |
| Host(s) | Prorocentrum lima |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Phototroph |
| Pathogenicity | Not Available |
Genome Summary
Dinoroseobacter shibae DFL 12 = DSM 16493, complete sequence.
Gene Summary
Adenine Count
645325 bp
Thymine Count
642548 bp
Guanine Count
1252068 bp
Cytosine Count
1249643 bp
Genome Length
3789584 bp
Protein-coding Genes
3619 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
6
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor/glpr family dna-binding transcription regulator | DSHI_RS12390 | Not Available | Negative | 2576547 - 2577347 | 28928.0 |
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | DSHI_RS12395 | Not Available | Positive | 2577535 - 2579637 | 75926.3 |
| l-rhamnose isomerase | DSHI_RS12400 | Not Available | Positive | 2579647 - 2580885 | 45551.2 |
| amidohydrolase | DSHI_RS12405 | Not Available | Negative | 2580993 - 2581871 | 32570.6 |
| tripartite tricarboxylate transporter permease | DSHI_RS12410 | Not Available | Negative | 2581868 - 2583352 | 51534.0 |
| tripartite tricarboxylate transporter tctb family protein | DSHI_RS12415 | Not Available | Negative | 2583349 - 2583807 | 16045.6 |
| tripartite tricarboxylate transporter substrate binding protein | DSHI_RS12420 | Not Available | Negative | 2583868 - 2584830 | 32512.6 |
| aldehyde dehydrogenase (nadp(+)) | DSHI_RS12425 | Not Available | Negative | 2584873 - 2586378 | 52017.1 |
| nad(p)-dependent oxidoreductase | DSHI_RS12430 | Not Available | Negative | 2586430 - 2587299 | 29363.2 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DSHI_RS12435 | Not Available | Negative | 2587296 - 2588300 | 35281.1 |
Pathways
1290 pathways
Health Effects
No health effects information available for this bacterium.
